vcpen (version 1.9)

kernel_linear: Variance Component Linear Kernel Matrix

Description

Variance component Linear kernel matrix from genotype dosage

Usage

kernel_linear(dose, method = "linear")

Arguments

dose

data.frame or matrix with

method

type of kernel; currently only linear kernel implemented

Value

square symmetric kernel matrix for subject similarity by genotype dosage

See Also

vcpen

Examples

# NOT RUN {
data(vcexample)
Kern1 <- kernel_linear(dose[,which(doseinfo[,1]==1)], method="linear")
Kern1[1:5,1:5]

# }