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vegan (version 2.6-4)

vegan-deprecated: Deprecated Functions in vegan package

Description

These functions are provided for compatibility with older versions of vegan only, and may be defunct as soon as the next release.

Usage

## use adonis2 instead
adonis(formula, data, permutations = 999, method = "bray",
    strata = NULL, contr.unordered = "contr.sum",
    contr.ordered = "contr.poly", parallel = getOption("mc.cores"), ...)
## use toCoda instead
as.mcmc.oecosimu(x)
as.mcmc.permat(x)

Arguments

formula, data, permutations, method, parallel, ...

See adonis2.

strata

groups (strata) within which to constrain permutations.

contr.unordered, contr.ordered

contrasts used for design matrix.

x

object to be tranformed.

Details

adonis2 replaces adonis with extended functionality and completely new internal design. The shared arguments of adonis are similar as in adonis2, but arguments contr.unordered and contr.ordered can set the contrasts within adonis.

See Also

Deprecated