Search synonyms of a taxon
#' Parents of a taxon
Remove name authors from taxon names
Check bibliographic references from Turboveg codes
Cover code translation
Standardisation of taxonomic names, especially taxon rank indicators and hybrid signs
name taxname.abbr
Taxonomic hierarchy levels
Load species traits from Turboveg reference list
Show metainfo of vegetation database or ecodbase
Load site data from Turboveg Database
Handling of taxonomy in vegetation data.
Simplify name parts for better string matching
Caching
Functions to access data from vegetation databases and evaluate taxon names
Write species-plot observations and site information to Turboveg database.
Dataframe of plot-species observations directly from Turboveg
Taxon reference list to be used
Tabulates vegetation tables from Turboveg database
Read list of available Turboveg2 databases in given Turboveg directory
Where is your Turboveg 2 installation path?
Reads a Turboveg XML file
Layer combinations
Combine species in vegetation matrix
Indicate site conditions with community weighted mean values of traits or with mode of gradient classes (sum of species amplitudes).
Rename data.frame columns to match Turboveg 2 conventions
Standardise taxon list field names to match the Taxonomic Concept Transfer Schema (TCS)
database path
Search taxonomic reference lists including concept synonomy and taxonomic hierarchy.
Download taxonomic databases
Recode species names, lettercodes or ID's
Query and get data back into a data.frame
Syntaxonomic frequency tables
src - dplyr src objects
Parse taxon strings into genus part and epitheta
Search taxonomic reference lists including concept synonomy and taxonomic hierarchy.
This is an example vegetation dataset to be included in package vegdata
Pipe operator
Layer combinations
Layer combinations