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vegdata (version 0.9.8)

Access Vegetation Databases and Treat Taxonomy

Description

Handling of vegetation data from different sources ( Turboveg ; the German national repository and others. Taxonomic harmonization (given appropriate taxonomic lists, e.g. the German taxonomic standard list "GermanSL", ).

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Version

Install

install.packages('vegdata')

Monthly Downloads

317

Version

0.9.8

License

GPL (>= 2)

Maintainer

Florian Jansen

Last Published

May 13th, 2020

Functions in vegdata (0.9.8)

monotypic

Creates a list of (regional) monotypic taxa from the given taxonomic checklist

elbaue

Species Data and Altitude from floodplains of the river Elbe, Germany.

syntab

Syntaxonomic frequency tables

tv.compRefl

Compare different taxonomical reference lists.

tv.biblio

Check bibliographic references from Turboveg codes

Templates for pseudo-species according to Turboveg layer informations.

tv.metadata

Show metainfo of vegetation database or ecodbase

tv.coverperc

Cover code translation

tv.readXML

Read Turboveg XML

tax

Query of Turboveg 2 taxonomic reference lists including (if available) concept synonomy and taxonomic hierarchy.

isc

Indicate site conditions with community weighted mean values of traits or with mode of gradient classes (sum of species amplitudes).

taxval

Handling of taxonomy in vegetation data.

vegdata-package

Functions to access data from vegetation databases and evaluate taxon names.

vegdata-internal

Internal vegdata functions

tv.obs

Dataframe of plot-species observations directly from Turboveg

tv.site

Load site data from Turboveg Database

tv.write

Write species-plot observations and site information to Turboveg database.

tv.traits

Load species traits from Turboveg reference list

tv.veg

Tabulates vegetation tables from Turboveg database