velocyto.R (version 0.6)

filter.genes.by.cluster.expression: Filter genes by requirining minimum average expression within at least one of the provided cell clusters

Description

Filter genes by requirining minimum average expression within at least one of the provided cell clusters

Usage

filter.genes.by.cluster.expression(emat, clusters,
  min.max.cluster.average = 0.1)

Arguments

emat

spliced (exonic) count matrix

clusters

named cell factor defining clusters

min.max.cluster.average

required minimum average expression count (no normalization is perfomed)

Value

filtered emat matrix