dist_prob_to_class

Returns the class with the highest probability in 
a genotype probability distribution. Function from MAPpoly.

internal

Provides a graphical user interface to integrate, visualize and explore results
from linkage and quantitative trait loci analysis, together with genomic information for autopolyploid
species. The app is meant for interactive use and allows users to optionally upload different sources
of information, including  gene annotation and alignment files, enabling the exploitation and search for
candidate genes in a genome browser. In its current version, 'VIEWpoly' supports inputs from 'MAPpoly',
'polymapR', 'diaQTL', 'QTLpoly', 'polyqtlR', 'GWASpoly', and 'HIDECAN' packages.

Cristiane Taniguti

viewpoly

A Shiny App to Visualize Genetic Maps and QTL Analysis in
Polyploid Species

Gabriel de Siqueira Gesteira

Jeekin Lau

Olivia Angelin-Bonnet

Susan Thomson

Guilherme da Silva Pereira

David Byrne

Zhao-Bang Zeng

Oscar Riera-Lizarazu

Marcelo Mollinari

dist_prob_to_class function

<dl><dt>geno</dt>
<dd>the probabilistic genotypes contained in the object
<code>'mappoly.data'</code></dd>
<dt>prob.thres</dt>
<dd>probability threshold to select the genotype. 
Values below this genotype are assumed as missing data</dd></dl>

Arguments

Returns the class with the highest probability in 
a genotype probability distribution. Function from MAPpoly. — dist_prob_to_class

<dl>

<dt>geno</dt>
<dd>the probabilistic genotypes contained in the object
<code>'mappoly.data'</code></dd>


<dt>prob.thres</dt>
<dd>probability threshold to select the genotype. 
Values below this genotype are assumed as missing data</dd>

</dl>

Returns the class with the highest probability in 
a genotype probability distribution. Function from MAPpoly.

dist_prob_to_class: Returns the class with the highest probability in a genotype probability distribution. Function from MAPpoly.

Description

Usage

Value

Arguments