draw_map_shiny: Draws linkage map, parents haplotypes and marker doses Adapted from MAPpoly

Description

Draws linkage map, parents haplotypes and marker doses Adapted from MAPpoly

draw_map_shiny(
  left.lim = 0,
  right.lim = 5,
  ch = 1,
  maps.dist,
  ph.p1,
  ph.p2,
  d.p1,
  d.p2,
  snp.names = TRUE,
  software = NULL
)

graphic representing selected section of a linkage group

left.lim: covered window in the linkage map start position
right.lim: covered window in the linkage map end position
ch: linkage group ID
ph.p1: list containing a data.frame for each group with parent 1 estimated phases. The data.frame contain the columns: 1) Character vector with chromosome ID; 2) Character vector with marker ID; 3 to (ploidy number)*2 columns with each parents haplotypes
ph.p2: list containing a data.frame for each group with parent 2 estimated phases. See ph.p1 parameter description.
d.p1: list containing a data.frame for each group with parent 1 dosages. The data.frame contain the columns: 1) character vector with chromosomes ID; 2) Character vector with markers ID; 3) Character vector with parent ID; 4) numerical vector with dosage
d.p2: list containing a data.frame for each group with parent 2 dosages. See d.p1 parameter description
snp.names: logical TRUE/FALSE. If TRUE it includes the marker names in the plot
software: character defined from each software it comes from
maps: list containing a vector for each linkage group markers with marker positions (named with marker names)