Virome browser

This is the github repository of the viromeBrowser R package.

Required packages that cannot be installed automatically are Rsamtools and Biostrings, install using following commands:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rsamtools")
BiocManager::install("Biostrings")

Installing the package from R should work using:

install.packages("viromeBrowser")

Or if there is a newer version on github:

install.packages("devtools")
library(devtools)
install_github("dnieuw/viromebrowser", build_vignette = TRUE)

Load the package using the following command:

library(viromeBrowser)

Read the vignette by running:

vignette("viromeBrowser")

Start the app by running

viromeBrowser()

The viromeBrowser logo was made with graphics from:

Vector Graphics by vecteezy.com