tstv_ratio

Inputs a filtered and rearranged vcf dataframe and calculates the transition/transversion ratio

Analysis of minor alleles in Illumina sequencing data of viral
genomes. Functions in 'vivaldi' primarily operate on vcf files.

David Gresham

<dl><dt>df</dt>
<dd>The filtered and rearranged variant dataframe</dd>
<dt>genome_size</dt>
<dd>Size of whole genome being used</dd></dl>

<dl>

<dt>df</dt>
<dd>The filtered and rearranged variant dataframe</dd>


<dt>genome_size</dt>
<dd>Size of whole genome being used</dd>

</dl>