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vqtl (version 2.0.5)

effects_over_genome_plot: effects_over_genome_plot

Description

Plots estimated effects and their standard errors at each locus in the genome.

Usage

effects_over_genome_plot(sov, covar_name_regex = ".",
  effect_type_regex = "(mean|var)", transform_var_effects = TRUE,
  se_ribbons = TRUE)

Arguments

sov

the scanonevar

covar_name_regex

regex that matches the covars we want to plot

effect_type_regex

regex that matches 'mean', 'var', or both

transform_var_effects

combine variance effects w intercept and exponentiate?

se_ribbons

Should a ribbon from estimate - se to estimate + se be plotted?

Value

the plot