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whitening (version 1.2.0)

Whitening and High-Dimensional Canonical Correlation Analysis

Description

Implements the whitening methods (ZCA, PCA, Cholesky, ZCA-cor, and PCA-cor) discussed in Kessy, Lewin, and Strimmer (2018) "Optimal whitening and decorrelation", , as well as the whitening approach to canonical correlation analysis allowing negative canonical correlations described in Jendoubi and Strimmer (2019) "A whitening approach to probabilistic canonical correlation analysis for omics data integration", .

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Version

Install

install.packages('whitening')

Monthly Downloads

383

Version

1.2.0

License

GPL (>= 3)

Maintainer

Korbinian Strimmer

Last Published

December 6th, 2020

Functions in whitening (1.2.0)

whiten

Whiten Data Matrix
nutrimouse

Nutrimouse Data
whitening-package

The whitening Package
lusc

TCGA LUSC Data
scca

Perform Canonical Correlation Analysis
whitening-internal

Internal whitening Functions
forina1986

Forina 1986 Wine Data - Extended UCI Wine Data
corplot

Plots of Correlations and Loadings
whiteningCrossCov

Compute Whitening Cross-Covariance Matrix
whiteningMatrix

Compute Whitening Matrix