dataRequest

This is a legacy alias for the 'clean' function to maintain compatibility with older code.

A comprehensive data analysis framework for NIH-funded research that streamlines workflows for both data cleaning and preparing NIH Data Archive ('NDA') submission templates. Provides unified access to multiple data sources ('REDCap', 'MongoDB', 'Qualtrics') through interfaces to their APIs, with specialized functions for data cleaning, filtering, merging, and parsing. Features automatic validation, field harmonization, and memory-aware processing to enhance reproducibility in multi-site collaborative research as described in Mittal et al. (2021) <doi:10.20900/jpbs.20210011>.

Joshua G. Kenney

wizaRdry

A Magical Framework for Collaborative & Reproducible Data
Analysis

Trevor F. Williams

Minerva K. Pappu

Michael J. Spilka

Danielle N. Pratt 

Victor J. Pokorny

Santiago Castiello de Obeso

Praveen Suthaharan

Christian R. Horgan

dataRequest function

<dl><dt>...</dt>
<dd>Strings, specifying the measures to process, which can be a Mongo collection, REDCap instrument, or Qualtrics survey.</dd>
<dt>csv</dt>
<dd>Optional; Boolean, if TRUE creates a .csv extract in ./tmp.</dd>
<dt>rdata</dt>
<dd>Optional; Boolean, if TRUE creates an .rdata extract in ./tmp.</dd>
<dt>spss</dt>
<dd>Optional; Boolean, if TRUE creates a .sav extract in ./tmp.</dd>
<dt>skip_prompt</dt>
<dd>Logical. If TRUE, skips confirmation prompts. If FALSE (default),
prompts for confirmation unless the user has previously chosen to remember their preference.</dd></dl>

Arguments

Alias for 'clean' — dataRequest

<dl>

<dt>...</dt>
<dd>Strings, specifying the measures to process, which can be a Mongo collection, REDCap instrument, or Qualtrics survey.</dd>


<dt>csv</dt>
<dd>Optional; Boolean, if TRUE creates a .csv extract in ./tmp.</dd>


<dt>rdata</dt>
<dd>Optional; Boolean, if TRUE creates an .rdata extract in ./tmp.</dd>


<dt>spss</dt>
<dd>Optional; Boolean, if TRUE creates a .sav extract in ./tmp.</dd>


<dt>skip_prompt</dt>
<dd>Logical. If TRUE, skips confirmation prompts. If FALSE (default),
prompts for confirmation unless the user has previously chosen to remember their preference.</dd>

</dl>

Alias for 'clean'

dataRequest: Alias for 'clean'

Description

Usage

Value

Arguments

Examples