xQTLquery_varId

Query variant with variant ID or dbSNP ID

Enables users-customized data retrieval, processing, analysis, and data visualization of molecular quantitative trait locus and gene expression data from public resources through the application programming interface <https://gtexportal.org/home/api-docs/index.html> of 'GTEx' and <http://www.ebi.ac.uk/eqtl/api> of 'eQTL cagalogue'.

Ruofan Ding

xQTLbiolinks

An R Package for Integrative Analysis of Quantitative Trait
Locus Data of 'xQTL'

Xudong Zou

Yangmei Qin

Gao Wang

Lei Li

xQTLquery_varId function

<dl><dt>variantName</dt>
<dd>(character) name of variant, dbsnp ID and variant id is supported, eg. "rs138420351" and "chr17_7796745_C_T_b38".</dd>
<dt>variantType</dt>
<dd>(character) options: "auto", "snpId" or "variantId". Default: "auto".</dd></dl>

Arguments

Query variant with variant ID or dbSNP ID — xQTLquery_varId

<dl>

<dt>variantName</dt>
<dd>(character) name of variant, dbsnp ID and variant id is supported, eg. "rs138420351" and "chr17_7796745_C_T_b38".</dd>


<dt>variantType</dt>
<dd>(character) options: "auto", "snpId" or "variantId". Default: "auto".</dd>

</dl>

xQTLquery_varId: Query variant with variant ID or dbSNP ID

Description

Usage

Value

Arguments

Examples