xQTLvisual_sqtl

Box plot with jittered points for showing number and significance of sQTL associations

Enables users-customized data retrieval, processing, analysis, and data visualization of molecular quantitative trait locus and gene expression data from public resources through the application programming interface <https://gtexportal.org/home/api-docs/index.html> of 'GTEx' and <http://www.ebi.ac.uk/eqtl/api> of 'eQTL cagalogue'.

Ruofan Ding

xQTLbiolinks

An R Package for Integrative Analysis of Quantitative Trait
Locus Data of 'xQTL'

Xudong Zou

Yangmei Qin

Gao Wang

Lei Li

xQTLvisual_sqtl function

<dl><dt>gene</dt>
<dd>(character) gene symbol or gencode id (versioned or unversioned are both supported).</dd>
<dt>geneType</dt>
<dd>(character) options: "auto","geneSymbol" or "gencodeId". Default: "auto".</dd></dl>

Arguments

Box plot with jittered points for showing number and significance of sQTL associations — xQTLvisual_sqtl

<dl>

<dt>gene</dt>
<dd>(character) gene symbol or gencode id (versioned or unversioned are both supported).</dd>


<dt>geneType</dt>
<dd>(character) options: "auto","geneSymbol" or "gencodeId". Default: "auto".</dd>

</dl>

xQTLvisual_sqtl: Box plot with jittered points for showing number and significance of sQTL associations

Description

Usage

Value

Arguments

Examples