Learn R Programming
xpose.xtras (version 0.0.2)

xplot_boxplot: Default xpose boxplot function

Description

Manually generate boxplots from an xpdb object.

Usage

xplot_boxplot(
  xpdb,
  mapping = NULL,
  type = "bo",
  xscale = "discrete",
  yscale = "continuous",
  orientation = "x",
  group = "ID",
  title = NULL,
  subtitle = NULL,
  caption = NULL,
  tag = NULL,
  plot_name = "boxplot",
  gg_theme,
  xp_theme,
  opt,
  quiet,
  jitter_seed,
  ...
)

Value

The desired plot

Arguments

xpdb

<xp_xtras> or <xpose_data> object

mapping

ggplot2 style mapping

type

See Details.

xscale

Defaults to discrete.

yscale

Defaults to continuous, used as check if orientation changed.

orientation

Defaults to x

group

Grouping for connecting lines through jitter

title

Plot title

subtitle

Plot subtitle

caption

Plot caption

tag

Plot tag

plot_name

Metadata name of plot

gg_theme

As in xpose

xp_theme

As in xpose

opt

Processing options for fetched data

quiet

Silence extra debugging output

jitter_seed

A numeric, optional seed to be used in jitters

...

Any additional aesthetics.

Details

For type-based customization of plots:

  • b box-whisker (using default quantiles)

  • p points (from geom_dotplot)

  • v violin (from geom_violin)

  • o outliers (show outliers)

  • l line through 0 (or as indicated in hline_yintercept or yline_xintercept)

  • s smooth line (from geom_smooth)

  • j jitter points (from geom_jitter)

  • c connecting lines for jitter points (from geom_path)