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xpose4 (version 4.5.0)

xpose.panel.default: Default panel function for Xpose 4

Description

This is the panel function for Xpose 4. This is not intended to be ised outside the xpose.plot.default function. Most of the arguments take their default values from xpose.data object but this can be overridden by supplying them as argument to xpose.plot.default.

Usage

xpose.panel.default(x, y,object,
           subscripts,
           groups = object@Prefs@Xvardef$id,
           grp.col = NULL,
           iplot = NULL,
           inclZeroWRES = FALSE,
           onlyfirst = FALSE,
           samp = NULL,
                      
           xvarnam = NULL,
           yvarnam = NULL,
           
           ###############################
           ## Prediction interval settings
           ###############################
           PI      = NULL,
           PI.subset=NULL,
           PI.bin.table=NULL,
           PI.real=NULL,  # can be NULL/TRUE
           PI.mirror=NULL,
           PI.ci = NULL,
           PPI = NULL,
           PI.mean = FALSE, # Should the mean be plotted in the VPCs 
           PI.delta.mean = FALSE, # Should the delta.mean be plotted in the VPCs 
           
           PI.limits= c(0.025, 0.975),#object@Prefs@Graph.prefs$PI.limits,

PI.arcol = "lightgreen",#object@Prefs@Graph.prefs$PI.arcol,

PI.up.lty = 2,#object@Prefs@Graph.prefs$PI.up.lty, PI.up.type = "l",#object@Prefs@Graph.prefs$PI.up.type, PI.up.col = "black",#object@Prefs@Graph.prefs$PI.up.col, PI.up.lwd = 2,#object@Prefs@Graph.prefs$PI.up.lwd, PI.down.lty = 2,#object@Prefs@Graph.prefs$PI.down.lty, PI.down.type = "l",#object@Prefs@Graph.prefs$PI.down.type, PI.down.col = "black",#object@Prefs@Graph.prefs$PI.down.col, PI.down.lwd = 2,#object@Prefs@Graph.prefs$PI.down.lwd, PI.med.lty = 1,#object@Prefs@Graph.prefs$PI.med.lty, PI.med.type = "l",#object@Prefs@Graph.prefs$PI.med.type, PI.med.col = "black",#object@Prefs@Graph.prefs$PI.med.col, PI.med.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd, PI.mean.lty = 3,#object@Prefs@Graph.prefs$PI.med.lty, PI.mean.type = "l",#object@Prefs@Graph.prefs$PI.med.type, PI.mean.col = "black",#object@Prefs@Graph.prefs$PI.med.col, PI.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd,

PI.delta.mean.lty = 3,#object@Prefs@Graph.prefs$PI.med.lty, PI.delta.mean.type = "l",#object@Prefs@Graph.prefs$PI.med.type, PI.delta.mean.col = "black",#object@Prefs@Graph.prefs$PI.med.col, PI.delta.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd, PI.real.up.lty = 2,#object@Prefs@Graph.prefs$PI.real.up.lty, PI.real.up.type = "l",#object@Prefs@Graph.prefs$PI.real.up.type, PI.real.up.col = "red",#object@Prefs@Graph.prefs$PI.real.up.col, PI.real.up.lwd = 2,#object@Prefs@Graph.prefs$PI.real.up.lwd, PI.real.down.lty = 2,#object@Prefs@Graph.prefs$PI.real.down.lty, PI.real.down.type = "l",#object@Prefs@Graph.prefs$PI.real.down.type, PI.real.down.col = "red",#object@Prefs@Graph.prefs$PI.real.down.col, PI.real.down.lwd = 2,#object@Prefs@Graph.prefs$PI.real.down.lwd, PI.real.med.lty = 1,#object@Prefs@Graph.prefs$PI.real.med.lty, PI.real.med.type = "l",#object@Prefs@Graph.prefs$PI.real.med.type, PI.real.med.col = "red",#object@Prefs@Graph.prefs$PI.real.med.col, PI.real.med.lwd = 2,#object@Prefs@Graph.prefs$PI.real.med.lwd,

PI.real.mean.lty = 3,#object@Prefs@Graph.prefs$PI.real.med.lty, PI.real.mean.type = "l",#object@Prefs@Graph.prefs$PI.real.med.type, PI.real.mean.col = "red",#object@Prefs@Graph.prefs$PI.real.med.col, PI.real.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.real.med.lwd,

PI.real.delta.mean.lty = 3,#object@Prefs@Graph.prefs$PI.real.med.lty, PI.real.delta.mean.type = "l",#object@Prefs@Graph.prefs$PI.real.med.type, PI.real.delta.mean.col = "red",#object@Prefs@Graph.prefs$PI.real.med.col, PI.real.delta.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.real.med.lwd,

PI.mirror.up.lty = 2,#object@Prefs@Graph.prefs$PI.mirror.up.lty, PI.mirror.up.type = "l",#object@Prefs@Graph.prefs$PI.mirror.up.type, PI.mirror.up.col = "darkgreen",#object@Prefs@Graph.prefs$PI.mirror.up.col, PI.mirror.up.lwd = 1,#object@Prefs@Graph.prefs$PI.mirror.up.lwd, PI.mirror.down.lty = 2,#object@Prefs@Graph.prefs$PI.mirror.down.lty, PI.mirror.down.type = "l",#object@Prefs@Graph.prefs$PI.mirror.down.type, PI.mirror.down.col = "darkgreen",#object@Prefs@Graph.prefs$PI.mirror.down.col, PI.mirror.down.lwd = 1,#object@Prefs@Graph.prefs$PI.mirror.down.lwd, PI.mirror.med.lty = 1,#object@Prefs@Graph.prefs$PI.mirror.med.lty, PI.mirror.med.type = "l",#object@Prefs@Graph.prefs$PI.mirror.med.type, PI.mirror.med.col = "darkgreen",#object@Prefs@Graph.prefs$PI.mirror.med.col, PI.mirror.med.lwd = 1,#object@Prefs@Graph.prefs$PI.mirror.med.lwd,

PI.mirror.mean.lty = 3,#object@Prefs@Graph.prefs$PI.mirror.med.lty, PI.mirror.mean.type = "l",#object@Prefs@Graph.prefs$PI.mirror.med.type, PI.mirror.mean.col = "darkgreen",#object@Prefs@Graph.prefs$PI.mirror.med.col, PI.mirror.mean.lwd = 1,#object@Prefs@Graph.prefs$PI.mirror.med.lwd,

PI.mirror.delta.mean.lty = 3,#object@Prefs@Graph.prefs$PI.mirror.med.lty, PI.mirror.delta.mean.type = "l",#object@Prefs@Graph.prefs$PI.mirror.med.type, PI.mirror.delta.mean.col = "darkgreen", PI.mirror.delta.mean.lwd = 1,#object@Prefs@Graph.prefs$PI.mirror.med.lwd,

PI.ci.up.arcol = "blue", PI.ci.up.lty = 3,#object@Prefs@Graph.prefs$PIuplty, PI.ci.up.type = "l",#object@Prefs@Graph.prefs$PIuptyp, PI.ci.up.col = "darkorange",#object@Prefs@Graph.prefs$PI.up.col, PI.ci.up.lwd = 2,#object@Prefs@Graph.prefs$PI.up.lwd, PI.ci.down.arcol = "blue", PI.ci.down.lty = 3,#object@Prefs@Graph.prefs$PIdolty, PI.ci.down.type = "l",#object@Prefs@Graph.prefs$PIdotyp, PI.ci.down.col = "darkorange",#object@Prefs@Graph.prefs$PI.down.col, PI.ci.down.lwd = 2,#object@Prefs@Graph.prefs$PI.down.lwd, PI.ci.med.arcol = "blue", PI.ci.med.lty = 4,#object@Prefs@Graph.prefs$PImelty, PI.ci.med.type = "l",#object@Prefs@Graph.prefs$PImetyp, PI.ci.med.col = "darkorange",#object@Prefs@Graph.prefs$PI.med.col, PI.ci.med.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd, PI.ci.mean.arcol = "purple", PI.ci.mean.lty = 4,#object@Prefs@Graph.prefs$PImelty, PI.ci.mean.type = "l",#object@Prefs@Graph.prefs$PImetyp, PI.ci.mean.col = "darkorange",#object@Prefs@Graph.prefs$PI.med.col, PI.ci.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd,

PI.ci.delta.mean.arcol = "purple", PI.ci.delta.mean.lty = 4,#object@Prefs@Graph.prefs$PImelty, PI.ci.delta.mean.type = "l",#object@Prefs@Graph.prefs$PImetyp, PI.ci.delta.mean.col = "darkorange",#object@Prefs@Graph.prefs$PI.med.col, PI.ci.delta.mean.lwd = 2,#object@Prefs@Graph.prefs$PI.med.lwd,

PI.ci.area.smooth=FALSE, ############################### ## end of PI settings ###############################

## Basic plot characteristics type = object@Prefs@Graph.prefs$type, col = object@Prefs@Graph.prefs$col, pch = object@Prefs@Graph.prefs$pch, cex = object@Prefs@Graph.prefs$cex, lty = object@Prefs@Graph.prefs$lty, lwd = object@Prefs@Graph.prefs$lwd, fill = object@Prefs@Graph.prefs$fill, ## Text label setting ids = NULL, idsmode=object@Prefs@Graph.prefs$idsmode, idsext =object@Prefs@Graph.prefs$idsext, idscex= object@Prefs@Graph.prefs$idscex, idsdir= object@Prefs@Graph.prefs$idsdir,

## abline settings abline= object@Prefs@Graph.prefs$abline, abllwd= object@Prefs@Graph.prefs$abllwd, abllty= object@Prefs@Graph.prefs$abllty, ablcol= object@Prefs@Graph.prefs$ablcol,

smooth= object@Prefs@Graph.prefs$smooth, smlwd = object@Prefs@Graph.prefs$smlwd, smlty = object@Prefs@Graph.prefs$smlty, smcol = object@Prefs@Graph.prefs$smcol, smspan= object@Prefs@Graph.prefs$smspan, smdegr= object@Prefs@Graph.prefs$smdegr, smooth.for.groups=NULL, lmline= object@Prefs@Graph.prefs$lmline, lmlwd = object@Prefs@Graph.prefs$lmlwd , lmlty = object@Prefs@Graph.prefs$lmlty , lmcol = object@Prefs@Graph.prefs$lmcol ,

suline = object@Prefs@Graph.prefs$suline, sulwd = object@Prefs@Graph.prefs$sulwd , sulty = object@Prefs@Graph.prefs$sulty , sucol = object@Prefs@Graph.prefs$sucol , suspan = object@Prefs@Graph.prefs$suspan, sudegr = object@Prefs@Graph.prefs$sudegr,

## Layout parameters grid = object@Prefs@Graph.prefs$grid, logy = FALSE, logx = FALSE,

## Force x variables to be continuous force.x.continuous = FALSE, ## Categorcal x-variable bwhoriz = object@Prefs@Graph.prefs$bwhoriz, bwratio = object@Prefs@Graph.prefs$bwratio, bwvarwid = object@Prefs@Graph.prefs$bwvarwid, bwdotpch = object@Prefs@Graph.prefs$bwdotpch, bwdotcol = object@Prefs@Graph.prefs$bwdotcol, bwdotcex = object@Prefs@Graph.prefs$bwdotcex, bwreccol = object@Prefs@Graph.prefs$bwreccol, bwrecfill= object@Prefs@Graph.prefs$bwrecfill, bwreclty = object@Prefs@Graph.prefs$bwreclty, bwreclwd = object@Prefs@Graph.prefs$bwreclwd, bwumbcol = object@Prefs@Graph.prefs$bwumbcol, bwumblty = object@Prefs@Graph.prefs$bwumblty, bwumblwd = object@Prefs@Graph.prefs$bwumblwd, bwoutcol = object@Prefs@Graph.prefs$bwoutcol, bwoutcex = object@Prefs@Graph.prefs$bwoutcex, bwoutpch = object@Prefs@Graph.prefs$bwoutpch, autocorr=FALSE, ## vline settings vline= NULL,#object@Prefs@Graph.prefs$abline, vllwd= 3,#object@Prefs@Graph.prefs$abllwd, vllty= 2,#object@Prefs@Graph.prefs$abllty, vlcol= "grey",#object@Prefs@Graph.prefs$ablcol, ## hline settings hline= NULL,#object@Prefs@Graph.prefs$abline, hllwd= 3,#object@Prefs@Graph.prefs$abllwd, hllty= 1,#object@Prefs@Graph.prefs$abllty, hlcol= "grey",#object@Prefs@Graph.prefs$ablcol, # ind.plots/group panels with single point per panel/group pch.ip.sp=pch, cex.ip.sp=cex, ...)

Arguments

x
Name(s) of the x-variable.
y
Name(s) of the y-variable.
object
An xpose.data object.
subscripts
The standard Trellis subscripts argument (see xyplot)
groups
Name of the variable used for superpose plots.
grp.col
Logical value indicating whether or not to use colour highlighting when groups are specified. NULL means no highlighting, while TRUE will identify group members by colour.
iplot
Is this an indvidual plots matrix? Internal use only.
inclZeroWRES
Logical value indicating whether rows with WRES=0 is included in the plot.
onlyfirst
Logical value indicating whether only the first row per individual is included in teh plot.
samp
An integer between 1 and object@Nsim (seexpose.data-class) specifying which of the simulated data sets to extract from SData.
xvarnam
Character string with the name of the x-variable.
yvarnam
Character string with the name of the y-variable.
type
1-character string giving the type of plot desired. The following values are possible, for details, see 'plot': '"p"' for points, '"l"' for lines, '"o"' for overplotted points and lines, '"b"', '"c"') for (empty if '"c"') points joined by
col
The color for lines and points. Specified as an integer or a text string. A full list is obtained by the R command colours(). The default is blue (col=4).
pch
The plotting character, or symbol, to use. Specified as an integer. See R help on points. The default is an open circle.
cex
The amount by which plotting text and symbols should be scaled relative to the default. 'NULL' and 'NA' are equivalent to '1.0'.
lty
The line type. Line types can either be specified as an integer (0=blank, 1=solid, 2=dashed, 3=dotted, 4=dotdash, 5=longdash, 6=twodash) or as one of the character strings '"blank"', '"solid"', '"dashed"', '"dotted"', '"dotdash"', '"longda
lwd
the width for lines. Specified as an integer. The default is 1.
fill
fill for areas in plot
ids
Logical value specifying whether to label data points.
idsmode
Determines the way text labels are added to plots. NULL means that only extreme points are labelled. Non-NULL means all data points are labelled. (See link{xpose.plot.default})
idsext
specifies the extent of the extremes to be used in labelling points. The default is 0.05 (only the most extreme 5% of points are labelled).
idscex
the amount by which labels should be scaled relative to the default. 'NULL' and 'NA' are equivalent to '1.0'.
idsdir
a string indicating the directions of the extremes to include in labelling. Possible values are "up", "down" and "both".
abline
Vector of arguments to the panel.abline function. No abline is drawn if NULL.
abllwd
Line width of any abline.
abllty
Line type of any abline.
ablcol
Line colour of any abline.
lmline
logical variable specifying whether a linear regression line should be superimposed over an xyplot. NULL ~ FALSE. (y~x)
lmlwd
Line width of the lmline.
lmlty
Line type of the lmline.
lmcol
Line colour of the lmline.
smooth
A NULL value indicates that no superposed line should be added to the graph. If TRUE then a smooth of the data will be superimposed.
smlwd
Line width of the x-y smooth.
smlty
Line type of the x-y smooth.
smcol
Line color of the x-y smooth.
smspan
The smoothness parameter for the x-y smooth. The default is 0.667. An argument to panel.loess.
smdegr
The degree of the polynomials to be used for the x-y smooth, up to 2. The default is 1. An argument to panel.loess.
smooth.for.groups
Should a smooth for each group be drawn?
suline
A NULL value indicates that no superposed line should be added to the graph. If non-NULL then this should be the vector (the same length as y) of data points to be used for the smoothed superposed line.
sulwd
Line width of the superposed smooth.
sulty
Line type of the superposed smooth.
sucol
Line color of the superposed smooth.
suspan
The smoothness parameter. The default is 0.667. An argument to panel.loess.
sudegr
The degree of the polynomials to be used, up to 2. The default is 1. An argument to panel.loess.
grid
logical value indicating whether a visual reference grid should be added to the graph. (Could use arguments for line type, color etc).
logy
Logical value indicating whether the y-axis should be logarithmic.
logx
Logical value indicating whether the y-axis should be logarithmic.
force.x.continuous
Logical value indicating whether x-values should be taken as continuous, even if categorical.
bwhoriz
logical value indicating whether box and whiskers should be horizontal or not. The default is FALSE.
bwratio
Ratio of box height to inter-box space. The default is 1.5. An argument for panel.bwplot.
bwvarwid
Logical. If TRUE, widths of boxplots are proportional to the number of points used in creating it. The default is FALSE. An argument for panel.bwplot.
bwdotpch
Graphical parameter controlling the dot plotting character in boxplots. 'bwdotpch="|"' is treated specially, by replacing the dot with a line. The default is 16. An argument for panel.bwplot
bwdotcol
Graphical parameter controlling the dot colour in boxplots - an integer or string. See 'col'. The default is black. An argument for panel.bwplot.
bwdotcex
The amount by which plotting text and symbols should be scaled relative to the default in boxplots. 'NULL' and 'NA' are equivalent to '1.0'. An argument for panel.bwplot.
bwreccol
The colour to use for the box rectangle in boxplots - an integer or string. The default is blue. See trellis.par.get and "box.rectangle".
bwrecfill
The colour to use for filling the box rectangle in boxplots - an integer or string. The default is transparent (none). See trellis.par.get and "box.rectangle".
bwreclty
The line type for the box rectangle in boxplots - an integer or string. The default is solid. See trellis.par.get and "box.rectangle".
bwreclwd
The width of the lines for the box rectangle in boxplots - an integer. The default is 1. See trellis.par.get and "box.rectangle".
bwumbcol
The colour to use for the umbrellas in boxplots - an integer or string. The default is blue. See trellis.par.get and "box.umbrella".
bwumblty
The line type for the umbrellas in boxplots - an integer or string. The default is solid.See trellis.par.get and "box.umbrella".
bwumblwd
the width of the lines for the umbrellas in boxplots - an integer. The default is 1. See trellis.par.get and "box.umbrella".
bwoutcol
The colour to use for the outliers in boxplots - an integer or string. The default is blue. See trellis.par.get and "box.symbol".
bwoutcex
The amount by which outlier points should be scaled relative to the default in boxplots. 'NULL' and 'NA' are equivalent to '1.0'. The default is 0.8. See trellis.par.get and "box.sym
bwoutpch
The plotting character, or symbol, to use for outlier points in boxplots. Specified as an integer. See R help on 'points'. The default is an open circle. See trellis.par.get and "bo
PI
Either "lines", "area" or "both" specifying whether prediction intervals (as lines, as a shaded area or both) should be computed from the data in SData and added to the display. NULL means no prediction interval.
PI.subset
The subset to be used for the PI.
PI.bin.table
The table used to create VPC plots. Has a specific format created by read.npc.vpc.results
PI.real
Plot the percentiles of the real data in the various bins. values can be NULL or TRUE. Note that for a bin with few actual observations the percentiles will be approximate. For example, the 95th percentile of 4 data points will always be
PI.mirror
Plot the percentiles of one simulated data set in each bin. values allowed are NULL, TRUE or AN.INTEGER.VALUE. TRUE takes the first mirror from PI.bin.table and
PI.ci
Plot the prediction interval of the simulated data's percentiles for each bin. Values can be "both", "area" or "lines" This can be thought of as a prediction interval about the PI.real or a confidence interval abo
PPI
The plot prediction interval. Has a specific format that must be followed. See setup.PPI.
PI.mean
Should the mean be plotted in the VPCs? TRUE or FALSE.
PI.delta.mean
Should the delta mean be plotted in the VPCs? TRUE or FALSE.
PI.limits
A vector of two values that describe the limits of the prediction interval that should be displayed. For example c(0.025, 0.975). These limits should be found in the PI.bin.table table. These limits are also use
PI.arcol
The color of the PI area
PI.up.lty
The upper line type. can be "dotted" or "dashed", etc.
PI.up.type
The upper type used for plotting. Defaults to a line.
PI.up.col
The upper line color
PI.up.lwd
The upper line width
PI.down.lty
The lower line type. can be "dotted" or "dashed", etc.
PI.down.type
The lower type used for plotting. Defaults to a line.
PI.down.col
The lower line color
PI.down.lwd
The lower line width
PI.med.lty
The median line type. can be "dotted" or "dashed", etc.
PI.med.type
The median type used for plotting. Defaults to a line.
PI.med.col
The median line color
PI.med.lwd
The median line width
PI.mean.lty
The mean line type. can be "dotted" or "dashed", etc.
PI.mean.type
The mean type used for plotting. Defaults to a line.
PI.mean.col
The mean line color
PI.mean.lwd
The mean line width
PI.delta.mean.lty
The delta.mean line type. can be "dotted" or "dashed", etc.
PI.delta.mean.type
The delta.mean type used for plotting. Defaults to a line.
PI.delta.mean.col
The delta.mean line color
PI.delta.mean.lwd
The delta.mean line width
PI.ci.up.arcol
The color of the upper PI.ci.
PI.ci.med.arcol
The color of the median PI.ci.
PI.ci.down.arcol
The color of the lower PI.ci.
PI.ci.up.lty
The upper line type. can be "dotted" or "dashed", etc.
PI.ci.up.type
The upper type used for plotting. Defaults to a line.
PI.ci.up.col
The upper line color
PI.ci.up.lwd
The upper line width
PI.ci.down.lty
The lower line type. can be "dotted" or "dashed", etc.
PI.ci.down.type
The lower type used for plotting. Defaults to a line.
PI.ci.down.col
The lower line color
PI.ci.down.lwd
The lower line width
PI.ci.med.lty
The median line type. can be "dotted" or "dashed", etc.
PI.ci.med.type
The median type used for plotting. Defaults to a line.
PI.ci.med.col
The median line color
PI.ci.med.lwd
The median line width
PI.ci.mean.arcol
The color of the mean PI.ci.
PI.ci.mean.lty
The mean line type. can be "dotted" or "dashed", etc.
PI.ci.mean.type
The mean type used for plotting. Defaults to a line.
PI.ci.mean.col
The mean line color
PI.ci.mean.lwd
The mean line width
PI.ci.delta.mean.arcol
The color of the delta.mean PI.ci.
PI.ci.delta.mean.lty
The delta.mean line type. can be "dotted" or "dashed", etc.
PI.ci.delta.mean.type
The delta.mean type used for plotting. Defaults to a line.
PI.ci.delta.mean.col
The delta.mean line color
PI.ci.delta.mean.lwd
The delta.mean line width
PI.real.up.lty
The upper line type. can be "dotted" or "dashed", etc.
PI.real.up.type
The upper type used for plotting. Defaults to a line.
PI.real.up.col
The upper line color
PI.real.up.lwd
The upper line width
PI.real.down.lty
The lower line type. can be "dotted" or "dashed", etc.
PI.real.down.type
The lower type used for plotting. Defaults to a line.
PI.real.down.col
The lower line color
PI.real.down.lwd
The lower line width
PI.real.med.lty
The median line type. can be "dotted" or "dashed", etc.
PI.real.med.type
The median type used for plotting. Defaults to a line.
PI.real.med.col
The median line color
PI.real.med.lwd
The median line width
PI.real.mean.lty
The mean line type. can be "dotted" or "dashed", etc.
PI.real.mean.type
The mean type used for plotting. Defaults to a line.
PI.real.mean.col
The mean line color
PI.real.mean.lwd
The mean line width
PI.real.delta.mean.lty
The delta.mean line type. can be "dotted" or "dashed", etc.
PI.real.delta.mean.type
The delta.mean type used for plotting. Defaults to a line.
PI.real.delta.mean.col
The delta.mean line color
PI.real.delta.mean.lwd
The delta.mean line width
PI.mirror.up.lty
The upper line type. can be "dotted" or "dashed", etc.
PI.mirror.up.type
The upper type used for plotting. Defaults to a line.
PI.mirror.up.col
The upper line color
PI.mirror.up.lwd
The upper line width
PI.mirror.down.lty
The lower line type. can be "dotted" or "dashed", etc.
PI.mirror.down.type
The lower type used for plotting. Defaults to a line.
PI.mirror.down.col
The lower line color
PI.mirror.down.lwd
The lower line width
PI.mirror.med.lty
The median line type. can be "dotted" or "dashed", etc.
PI.mirror.med.type
The median type used for plotting. Defaults to a line.
PI.mirror.med.col
The median line color
PI.mirror.med.lwd
The median line width
PI.mirror.mean.lty
The mean line type. can be "dotted" or "dashed", etc.
PI.mirror.mean.type
The mean type used for plotting. Defaults to a line.
PI.mirror.mean.col
The mean line color
PI.mirror.mean.lwd
The mean line width
PI.mirror.delta.mean.lty
The delta.mean line type. can be "dotted" or "dashed", etc.
PI.mirror.delta.mean.type
The delta.mean type used for plotting. Defaults to a line.
PI.mirror.delta.mean.col
The delta.mean line color
PI.mirror.delta.mean.lwd
The delta.mean line width
PI.ci.area.smooth
Should the "area" for PI.ci be smoothed to match the "lines" argument? Allowed values are TRUE/FALSE. The "area" is set by default to show the bins used in the PI.ci computation. By smoothing, in
autocorr
Is this an autocorrelation plot? Values can be TRUE/FALSE.
vline
Add a vertical line to the plot at the values specified.
vllwd
Width (lwd) of vertical line
vllty
Line type (lty) for vertical line
vlcol
Color (col) of vertical line
hline
Add a horizontal line to the plot at the values specified.
hllwd
Width (lwd) of horizontal line
hllty
Line type (lty) for horizontal line
hlcol
Color (col) of horizontal line
pch.ip.sp
If there is a panel with just one observation then this specifies the type of points for the DV, IPRED and PRED respectively.
cex.ip.sp
If there is a panel with just one observation then this specifies the size of the points for the DV, IPRED and PRED respectively.
...
Other arguments that may be needed in the function.

See Also

xpose.data-class, Cross-references above.