This is a wrapper function for the lattice bwplot
function.
xpose.plot.bw(
x,
y,
object,
inclZeroWRES = FALSE,
onlyfirst = FALSE,
samp = NULL,
panel = xpose.panel.bw,
groups = NULL,
ids = FALSE,
logy = FALSE,
logx = FALSE,
aspect = object@Prefs@Graph.prefs$aspect,
funy = NULL,
funx = NULL,
PI = FALSE,
by = object@Prefs@Graph.prefs$condvar,
force.by.factor = FALSE,
ordby = object@Prefs@Graph.prefs$ordby,
byordfun = object@Prefs@Graph.prefs$byordfun,
shingnum = object@Prefs@Graph.prefs$shingnum,
shingol = object@Prefs@Graph.prefs$shingol,
strip = function(...) strip.default(..., strip.names = c(TRUE, TRUE)),
subset = xsubset(object),
main = xpose.create.title(x, y, object, subset, funx, funy, ...),
xlb = xpose.create.label(x, object, funx, logx, ...),
ylb = xpose.create.label(y, object, funy, logy, ...),
scales = list(),
suline = object@Prefs@Graph.prefs$suline,
binvar = NULL,
bins = 10,
mirror = FALSE,
max.plots.per.page = 4,
mirror.aspect = "fill",
pass.plot.list = FALSE,
x.cex = NULL,
y.cex = NULL,
main.cex = NULL,
mirror.internal = list(strip.missing = missing(strip)),
...
)Name(s) of the x-variable.
Name(s) of the y-variable.
An xpose.data object.
A logical value indicating whether rows with WRES=0 should be plotted.
A logical value indicating whether only the first row per individual should be included in the plot.
An integer between 1 and object@Nsim
(seexpose.data-class) specifying which of the simulated data
sets to extract from SData.
The name of the panel function to use. This should in most
cases be left as xpose.panel.bw.
A string with the name of any grouping variable (used as the
groups argument to panel.xyplot.
A logical value indicating whether text labels should be used as
plotting symbols (the variable used for these symbols indicated by the
idlab Xpose data variable).
Logical value indicating whether the y-axis should be logarithmic.
Logical value indicating whether the x-axis should be logarithmic.
The aspect ratio of the display (see
bwplot).
String with the name of a function to apply to the y-variable before plotting, e.g. "abs".
String with the name of a function to apply to the x-variable before plotting, e.g. "abs".
Either "lines", "area" or "both" specifying whether prediction
intervals (as lines, as a shaded area or both) should be computed from the
data in SData and added to the display. NULL means no
prediction interval.
A string or a vector of strings with the name(s) of the conditioning variables.
Logical value. If TRUE, and by is not
NULL, the variable specified by by is taken as categorical.
A string with the name of a variable to be used to reorder any
factor conditioning variables (by). The variable is used in a call to
the reorder function.
The name of the function to be used when reordering a factor
conditioning variable (see argument ordby).
The number of shingles ("parts") a continuous conditioning variable should be divided into.
The amount of overlap between adjacent shingles (see argument
shingnum)
The name of the function to be used as the strip argument to
the bwplot.
A string giving the subset expression to be applied to the
data before plotting. See xsubset.
A string giving the plot title or NULL if none.
A string giving the label for the x-axis. NULL if none.
A string giving the label for the y-axis. NULL if none.
A list to be used for the scales argument in
bwplot.
A string giving the variable to be used to construct a smooth
to superpose on the display. NULL if none. This argument is used if
you want to add a superpose line of a variable not present in the y
list of variables.
Variable to be used for binning.
The number of bins to be used. The default is 10.
Should we create mirror plots from simulation data? Value can
be FALSE, TRUE or 1 for one mirror plot, or 3
for three mirror plots.
The maximum number of plots per page that can be created with the mirror plots.
The aspect ratio of the plots used for mirror functionality.
Should we pass the list of plots created with mirror
or should we print them directly. Values can be TRUE/FALSE.
The size of the x-axis label.
The size of the y-axis label.
The size of the title.
an internal mirror argument used in
create.mirror. Checks if the strip argument from
bwplot has been used.
Other arguments passed to xpose.panel.bw.
E. Niclas Jonsson, Mats Karlsson, Andrew Hooker & Justin Wilkins
xpose.data-class, Cross-references above.
if (FALSE) {
## xpdb5 is an Xpose data object
## We expect to find the required NONMEM run and table files for run
## 5 in the current working directory
xpdb5 <- xpose.data(5)
## Box & whisker plot of WRES vs PRED
xpose.plot.bw("WRES", "PRED", xpdb5, binvar="PRED")
}
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