get_clade

Extract the clade of a desired rank in a lineage

Provides functions to manage taxonomy when lineages are
described with strings and ranks separated with special patterns like
"|*__" or ";*__".

Antoine Bichat

yatah

Yet Another TAxonomy Handler

get_clade function

<dl><dt>lineage</dt>
<dd>string. Vector of lineages.</dd>
<dt>rank</dt>
<dd>The desired rank of the clade.</dd>
<dt>same</dt>
<dd>logical. Does the lineage have the same depth? Default to <code>TRUE</code>.</dd></dl>

Arguments

Extract the clade of a desired rank in a lineage — get_clade

<dl>

<dt>lineage</dt>
<dd>string. Vector of lineages.</dd>


<dt>rank</dt>
<dd>The desired rank of the clade.</dd>


<dt>same</dt>
<dd>logical. Does the lineage have the same depth? Default to <code>TRUE</code>.</dd>

</dl>

get_clade: Extract the clade of a desired rank in a lineage

Description

Usage

Value

Arguments

Examples