trim_common

Trim lineages until the shallowest common rank.

Provides functions to manage taxonomy when lineages are
described with strings and ranks separated with special patterns like
"|*__" or ";*__".

Antoine Bichat

yatah

Yet Another TAxonomy Handler

trim_common function

<dl><dt>lineage</dt>
<dd>string. Vector of lineages.</dd>
<dt>remove_void</dt>
<dd>Should void ranks be removed? Default to <code>TRUE</code>.</dd>
<dt>only_tail</dt>
<dd>Logical to be passed to <code>trim_void()</code>. Used only if
<code>remove_void</code> is set to <code>TRUE</code>.</dd></dl>

Arguments

Trim lineages until the shallowest common rank. — trim_common

<dl>

<dt>lineage</dt>
<dd>string. Vector of lineages.</dd>


<dt>remove_void</dt>
<dd>Should void ranks be removed? Default to <code>TRUE</code>.</dd>


<dt>only_tail</dt>
<dd>Logical to be passed to <code>trim_void()</code>. Used only if
<code>remove_void</code> is set to <code>TRUE</code>.</dd>

</dl>

trim_common: Trim lineages until the shallowest common rank.

Description

Usage

Value

Arguments

Examples