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Function permPool-class [ChIPpeakAnno v3.6.5]
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classes
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Class "permPool"
description
An object of class "permPool" represents the possible locations to do permutation test.
Function annoGR-class [ChIPpeakAnno v3.6.5]
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classes
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Class annoGR
description
An object of class annoGR represents the annotation data could be used by annotationPeakInBatch.
Function bindist-class [ChIPpeakAnno v3.6.5]
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Class "bindist"
description
An object of class "bindist" represents the relevant fixed-width range of binding site from the feature and number of possible binding site in each range.
Function csAnno-class [ChIPseeker v1.8.6]
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classes
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Class "csAnno" This class represents the output of ChIPseeker Annotation
description
Class "csAnno" This class represents the output of ChIPseeker Annotation
Function cct-class [CCTpack v1.5.2]
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classes
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Class "cct"
description
Virtual class that contains "rjags" class, used to create plot, summary, and screeplot methods for the cctfit objects from package CCTpack.
Function DataObject-class [datapack v1.3.1]
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classes
title
DataObject wraps raw data with system-level metadata
description
DataObject is a wrapper class that associates raw data or a data file with system-level metadata describing the data. The system metadata includes attributes such as the object's identifier, type, size, checksum, owner, version relationship to other objects, access rules, and other critical metadata. The SystemMetadata is compliant with the DataONE federated repository network's definition of SystemMetadata, and is encapsulated as a separate object of type SystemMetadata that can be manipulated as needed. Additional science-level and domain-specific metadata is out-of-scope for SystemMetadata, which is intended only for critical metadata for managing objects in a repository system.
Function DistModel [dismo v1.1-4]
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classes
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Class "DistModel"
description
Parent class for a number of distribution models defined in the dismo package (those created by bioclim, domain, maxent and mahal). This is a virtual Class, no objects may be direclty created from it.
Function ModelEvaluation [dismo v1.1-4]
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classes
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Class "ModelEvaluation"
description
Class to store results of model cross-validation with presence/absence (0/1) data
Function mle2-class [bbmle v1.0.20]
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classes
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Class "mle2". Result of Maximum Likelihood Estimation.
description
This class encapsulates results of a generic maximum likelihood procedure.
Function profile.mle2-class [bbmle v1.0.20]
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classes
title
Methods for likelihood profiles
description
Definition of the mle2 likelihood profile class, and applicable methods