Function miscellaneous [flowClust v3.10.1]

keywords

cluster

title

Various Functions for Retrieving Information from Clustering Results

description

Various functions are available to retrieve the information criteria (criterion), the posterior probabilities of clustering memberships $z$ (posterior), the “weights” $u$ (importance), the uncertainty (uncertainty), and the estimates of the cluster proportions, means and variances (getEstimates) resulted from the clustering (filtering) operation.

Function Map,flowClust-method [flowClust v3.10.1]

keywords

cluster

title

Cluster Assignment Based on Clustering Results

description

This method performs cluster assignment according to the posterior probabilities of clustering memberships resulted from the clustering (filtering) operations. Outliers identified will be left unassigned by default.

Function adjustedRand [clues v0.5.9]

keywords

cluster

title

Calculate Agreement Indices Between Two Partitions for a Data Set

description

Calculate the five agreement indices: Rand index, Hubert and Arabie's adjusted Rand index, Morey and Agresti's adjusted Rand index, Fowlkes and Mallows's index, and Jaccard index, which measure the agreement between any two partitions for a data set.

Function plotAvgCurves [clues v0.5.9]

keywords

cluster

title

Average Trajectory Plot for Each Cluster

description

Average trajectory plot for each cluster.

Function Maronna [clues v0.5.9]

keywords

cluster

title

The Maronna Data Set

description

The Maronna data set.

Function clues [clues v0.5.9]

keywords

cluster

title

Clustering Method Based on Local Shrinking

description

Automatically estimate the number of clusters for a given data set and get a partition.

Function get_Silhouette [clues v0.5.9]

keywords

cluster

title

Compute Silhouette Index

description

Compute Silhouette index for a given partition of a data set.

Function compClust [clues v0.5.9]

keywords

cluster

title

Compare different partitions for a data set

description

Compare different partitions for a data set based on agreement indices, average sihouette index and CH index.

Function Vowel [clues v0.5.9]

keywords

cluster

title

The Vowel Data Set

description

The vowel data set studied in Hastie, Tibshirani and Friedman (2001).

Function plotClusters [clues v0.5.9]

keywords

cluster

title

Scatter Plots of Clusters in Specified Dimensions

description

Scatter plots of clusters in specified dimensions. If more than two dimensions are specified, pair-wise scatter plots will be plotted.