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Function miscellaneous [flowClust v3.10.1]
keywords
cluster
title
Various Functions for Retrieving Information from Clustering Results
description
Various functions are available to retrieve the information criteria (criterion), the posterior probabilities of clustering memberships $z$ (posterior), the “weights” $u$ (importance), the uncertainty (uncertainty), and the estimates of the cluster proportions, means and variances (getEstimates) resulted from the clustering (filtering) operation.
Function Map,flowClust-method [flowClust v3.10.1]
keywords
cluster
title
Cluster Assignment Based on Clustering Results
description
This method performs cluster assignment according to the posterior probabilities of clustering memberships resulted from the clustering (filtering) operations. Outliers identified will be left unassigned by default.
Function adjustedRand [clues v0.5.9]
keywords
cluster
title
Calculate Agreement Indices Between Two Partitions for a Data Set
description
Calculate the five agreement indices: Rand index, Hubert and Arabie's adjusted Rand index, Morey and Agresti's adjusted Rand index, Fowlkes and Mallows's index, and Jaccard index, which measure the agreement between any two partitions for a data set.
Function plotAvgCurves [clues v0.5.9]
keywords
cluster
title
Average Trajectory Plot for Each Cluster
description
Average trajectory plot for each cluster.
Function Maronna [clues v0.5.9]
keywords
cluster
title
The Maronna Data Set
description
The Maronna data set.
Function clues [clues v0.5.9]
keywords
cluster
title
Clustering Method Based on Local Shrinking
description
Automatically estimate the number of clusters for a given data set and get a partition.
Function get_Silhouette [clues v0.5.9]
keywords
cluster
title
Compute Silhouette Index
description
Compute Silhouette index for a given partition of a data set.
Function compClust [clues v0.5.9]
keywords
cluster
title
Compare different partitions for a data set
description
Compare different partitions for a data set based on agreement indices, average sihouette index and CH index.
Function Vowel [clues v0.5.9]
keywords
cluster
title
The Vowel Data Set
description
The vowel data set studied in Hastie, Tibshirani and Friedman (2001).
Function plotClusters [clues v0.5.9]
keywords
cluster
title
Scatter Plots of Clusters in Specified Dimensions
description
Scatter plots of clusters in specified dimensions. If more than two dimensions are specified, pair-wise scatter plots will be plotted.