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Showing results 1 to 10 of 1,084.


Function aCGH.process [aCGH v1.50.0]
keywords
file
title
Process data in aCGH object
description
This function takes object of class aCGH, and filters clones based on their mapping information and proportion missing. It also average duplicated clones and reports quality statistic.
Function aCGH.read.Sprocs [aCGH v1.50.0]
keywords
file
title
Create object of class "aCGH" from Sproc files
description
This function reads in two-channel Array Comparative Genomic Hybridization Sproc files, flags them for bad quality and missing data, and creates object of class aCGH.
Function readImaGeneHeader [limma v3.28.14]
keywords
file
title
Read ImaGene Header Information
description
Read the header information from an ImaGene image analysis output file. This function is used internally by read.maimages and is not usually called directly by users.
Function HarshComp [Harshlight v1.44.0]
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file
title
a blemish detection program for microarray chips: extended and compact defects only
description
Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function HarshExt [Harshlight v1.44.0]
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file
title
a blemish detection program for microarray chips: extended defects only
description
Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function Harshlight [Harshlight v1.44.0]
keywords
file
title
a blemish detection program for microarray chips: extended, diffuse, and compact defects
description
Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function getCoExpGeneofLncs [LncPriCNet v1.0]
keywords
file
title
Get Co-expressed Genes of LncRNAs
description
Get co-expressed genes of one or some lncRNAs based on the multi-omics network.
Function getDiseaseInf [LncPriCNet v1.0]
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file
title
Get All Disease Information based on phenotype id (OMIM Id) Provided by LncPriCNet Package
description
Get all disease information provided by LncPriCNet package by OMIMID. This function will provide you known disease genes and lncRNAs corresponding phenotype.
Function getTopDiseaseLncRNAs [LncPriCNet v1.0]
keywords
file
title
Get the Disease Risk LncRNAs
description
prioritize the disease candidate lncRNAs by integrated multi-omics information.
Function ldmultinom [SpatialEpi v1.2.3]
keywords
file
title
log multinomial Density
description
Compute log of density of multinomial