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Showing results 1 to 10 of 983.
Function aCGH.process [aCGH v1.50.0]
- keywords
- file
- title
- Process data in aCGH object
- description
- This function takes object of class aCGH, and filters clones based on their mapping information and proportion missing. It also average duplicated clones and reports quality statistic.
Function aCGH.read.Sprocs [aCGH v1.50.0]
- keywords
- file
- title
- Create object of class "aCGH" from Sproc files
- description
- This function reads in two-channel Array Comparative Genomic Hybridization Sproc files, flags them for bad quality and missing data, and creates object of class aCGH.
Function readImaGeneHeader [limma v3.28.14]
- keywords
- file
- title
- Read ImaGene Header Information
- description
- Read the header information from an ImaGene image analysis output file. This function is used internally by read.maimages and is not usually called directly by users.
Function HarshComp [Harshlight v1.44.0]
- keywords
- file
- title
- a blemish detection program for microarray chips: extended and compact defects only
- description
- Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function HarshExt [Harshlight v1.44.0]
- keywords
- file
- title
- a blemish detection program for microarray chips: extended defects only
- description
- Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function Harshlight [Harshlight v1.44.0]
- keywords
- file
- title
- a blemish detection program for microarray chips: extended, diffuse, and compact defects
- description
- Harshlight automatically detects and masks blemishes in microarray chips of class AffyBatch
Function getCoExpGeneofLncs [LncPriCNet v1.0]
- keywords
- file
- title
- Get Co-expressed Genes of LncRNAs
- description
- Get co-expressed genes of one or some lncRNAs based on the multi-omics network.
Function getDiseaseInf [LncPriCNet v1.0]
- keywords
- file
- title
- Get All Disease Information based on phenotype id (OMIM Id) Provided by LncPriCNet Package
- description
- Get all disease information provided by LncPriCNet package by OMIMID. This function will provide you known disease genes and lncRNAs corresponding phenotype.
Function getTopDiseaseLncRNAs [LncPriCNet v1.0]
- keywords
- file
- title
- Get the Disease Risk LncRNAs
- description
- prioritize the disease candidate lncRNAs by integrated multi-omics information.
Function ldmultinom [SpatialEpi v1.2.3]
- keywords
- file
- title
- log multinomial Density
- description
- Compute log of density of multinomial