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Showing results 1 to 10 of 8,954.


Function summary-methods [PST v0.84.1]
keywords
methods
title
Summary of variable length Markov chain model
description
Summary of a variable length Markov chain model stored in a probabilistic suffix tree.
Function cmine [PST v0.84.1]
keywords
methods
title
Mining contexts
description
Extracting contexts in a PST satisfying user defined criterion
Function stsm-char2numeric-methods [stsm.class v1.3]
keywords
methods
title
State Space Representation of Objects of Class stsm
description
This method returns the state space representation of time series models defined in the class stsm.
Function genRandBioSeqs [kebabs v1.6.2]
keywords
methods
title
Generate Random Biological Sequences
description
Generate biological sequences with uniform random distribution of alphabet characters.
Function drawEScurve [ASEB v1.16.0]
keywords
methods
title
draw Enriment Score curves for specific sites
description
This function is used to draw Enriment Score curves for specific sites.
Function drawStat [ASEB v1.16.0]
keywords
methods
title
draw P-values and enrichment scores for all lysine sites on a specific protein
description
This function is used to show P-values and enrichment scores for all lysine sites on a specific protein.
Function asebProteins [ASEB v1.16.0]
keywords
methods
title
prediction of all lysine sites on a specific protein that can be acetylated
description
This function is used to predict all lysine sites on a specific protein that can be acetylated by a specific KAT-family.
Function asebSites [ASEB v1.16.0]
keywords
methods
title
prediction of lysine sites that can be acetylated
description
This function is used to predict lysine sites that can be acetylated by a specific KAT-family.
Function readSequence [ASEB v1.16.0]
keywords
methods
title
read sequences from file
description
This function is used to read sequences from FASTA format file.
Function shinySummarize-methods [shinyMethyl v1.6.2]
keywords
methods
title
Summarizing a large 450K experiment into a shinyMethylSet
description
Summarizing methylation data from a RGChannelSet or GenomicRatioSet into a shinyMethylSet needed to launch the interactive interface of shinyMethyl.