Function phcpe [CPE v1.5.1]

keywords

survival

title

Gonen \& Heller Concordance Probability Estimate for the Cox Proportional Hazards model

description

A function to calculate Gonen \& Heller concordance probability estimate (CPE) for the Cox proportional hazards model.

Function phcpe2 [CPE v1.5.1]

keywords

survival

title

Gonen \& Heller Concordance Probability Estimate for the Cox Proportional Hazards model

description

A function to calculate Gonen \& Heller concordance probability estimate (CPE) for the Cox proportional hazards model.

Function coxphERR [clinfun v1.0.15]

keywords

survival

title

Heller Explained Relative Risk

description

Calculates the contribution of a subset of covariates to the explained relative risk derived from the full Cox proportional hazards model.

Function coxphCPE [clinfun v1.0.15]

keywords

survival

title

Gonen \& Heller Concordance Probability Estimate

description

Calculates the Concordance Probability Estimate for a Cox model.

Function coxphQuantile [clinfun v1.0.15]

keywords

survival

title

Survival time quantile as a function of covariate

description

Draws a quantile curve of survival distribution as a function of covariate.

Function predict.coxph_mpl [survivalMPL v0.2]

keywords

survival

title

Predictions for a Cox model

description

Compute (and plot) predictions of instantaneous risk and of probability of survival for a model fitted by coxph_mpl.

Function coxph_mpl.object [survivalMPL v0.2]

keywords

survival

title

MPL Proportional Hazards Regression Object

description

This class of objects is returned by the coxph_mpl class of functions to represent a proportional hazards model fitted by maximum penalised likelihood. Objects of this class have methods for the functions print, summary, plot, residuals and predict. All components described under Arguments must be included in a legitimate coxph_mpl object.

Function coef.coxph_mpl [survivalMPL v0.2]

keywords

survival

title

Extract coefficients of a coxph_mpl Object or of its summary

description

Extract the coefficients of the model part of interest of a coxph_mpl object, and the matrix of coefficients of the model part of interest and corresponding standard errors, \(z\)-statistics and \(p\)-values of a summary.coxph_mpl object.

Function coxph_mpl [survivalMPL v0.2]

keywords

survival

title

Fit Cox Proportional Hazards Regression Model Via MPL

description

Simultaneously estimate the regression coefficients and the baseline hazard function of proportional hazard Cox models using maximum penalised likelihood (MPL).

Function residuals.coxph_mpl [survivalMPL v0.2]

keywords

survival

title

Residuals for a Cox model

description

Compute martingale and Cox and Snell residuals for a model fitted by coxph_mpl. Return objects are of class residuals.coxph_mpl and have methods for plot.