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Function tick [gmDatabase v0.5.0]
keywords
utilities
title
Create a unique name
description
tick creates a unique name out of x
Function replaceVarsInExpression [gmDatabase v0.5.0]
keywords
utilities
title
Replace Variables in Expressions
description
Replaces the variables in expressions by something else and returns the expression.
Function extractVignettes [biocViews v1.40.1]
keywords
utilities
title
Extract pdf vignettes from local package repository
description
These functions extract pdf or HTML files from the inst/doc subdirectory of R source packages archives (.tar.gz) found in a local package repository. All pdf files found in inst/doc will be extracted. With extractHTMLDocuments, all HTML files except index.html will be extracted. Only source package archives will be processed. The extracted pdf or HTML files will be extracted under destDir and will be found in PKGNAME/inst/doc/. Prior to extraction, all pdf files in destDir/PKGNAME/inst/doc will be removed.
Function writePackageDetailHtml [biocViews v1.40.1]
keywords
utilities
title
Write HTML files for packages in a CRAN-style repository
description
This function creates package "homepages" that describe the package and provide links to download package artifacts in the repository.
Function writeRepositoryHtml [biocViews v1.40.1]
keywords
utilities
title
Write package descriptions and a repository index as HTML
description
This function generates an HTML file for each package in a repository and generates an index.html file that provides an alphabetized listing of the packages.
Function writeRFilesFromVignettes [biocViews v1.40.1]
keywords
utilities
title
Write R files from vignettes
description
Ensures that .R files from vignette code chunks are written out.
Function genReposControlFiles [biocViews v1.40.1]
keywords
utilities
title
Generate CRAN-style repository control files
description
This function generates control files for CRAN-style repositories. For each path specified in contribPaths a PACKAGES file is written. In addition, two top-level control files are created: REPOSITORY contains information about the specified contrib paths. VIEWS contains metadata for all packages in the repository including the paths to any extracted vignettes, if found. This file is useful for generating HTML views of the repository.
Function writeTopLevelView [biocViews v1.40.1]
keywords
utilities
title
Write the view for the root of a vocabulary to disk
description
Given a directory and a vocabulary represented as a graphNEL containing a DAG of terms, write the top-level term to disk as HTML. This assumes your vocabulary has a single term with no parents.
Function extractTopLevelFiles [biocViews v1.40.1]
keywords
utilities
title
Extract files from the top level of source package tarballs
description
Extracts files from source tarballs of packages.
Function extractNEWS [biocViews v1.40.1]
keywords
utilities
title
Extract NEWS files from source package tarballs
description
Extracts NEWS files from source tarballs of packages.