Michelle Kendall

Michelle Kendall

4 packages on CRAN

phyloTop

cran
99.99th

Percentile

Tools for calculating and viewing topological properties of phylogenetic trees.

treescape

cran
99.99th

Percentile

Tools for the exploration of distributions of phylogenetic trees. This package includes a shiny interface which can be started from R using 'treescapeServer()'.

treespace

cran
99.99th

Percentile

Tools for the exploration of distributions of phylogenetic trees. This package includes a 'shiny' interface which can be started from R using treespaceServer(). For further details see Jombart et al. (2017) <DOI:10.1111/1755-0998.12676>.

phangorn

cran
99.99th

Percentile

Package contains methods for estimation of phylogenetic trees and networks using Maximum Likelihood, Maximum Parsimony, distance methods and Hadamard conjugation. Allows to compare trees, models selection and offers visualizations for trees and split networks.