Arguments
gene.lists
(Required). Lists of character vectors representing the gene lists.
To compare the enrichment of differential genes specify for each list the up- and down- regulated genes, separately.
david.user
(Required). Character vector to specify the email of a given registered DAVID; it is necessary to use the DAVID web service.
idType
(Optional). Character with the type of submitted ids.
Default value is "AFFYMETRIX_3PRIME_IVT_ID".
listType
(Optional). Character with the type of list (Gene, Background). Default value is "Gene".
easeScore
(Optional). Numeric with the EASE score. Default value is 1 (see DAVID Help page).
annotation
(Optional). Character vector with the category name to use in the functional annotation analysis. Default value is "KEGG_PATHWAY".
species
(Optional). Character vector with the species to use. Default value is NA. This means that DAVID will use the specie found for the submitted gene list.