Usage
SSplotBiology(replist, plot = TRUE, print = FALSE, add = FALSE, subplots
= 1:8, col1 = "red", col2 = "blue", legendloc = "topleft",
plotdir = "default", labels = c("Length (cm)", "Age (yr)",
"Maturity", "Mean weight (kg) in last year", "Spawning output",
"Length (cm, middle of the year)", "Natural mortality",
"Female weight (kg)", "Female length (cm)",
"Default fecundity label"), pwidth = 7, pheight = 7,
punits = "in", res = 300, ptsize = 12, cex.main = 1,verbose = TRUE)Arguments
replist
list created by SS_output
plot
plot to active plot device?
subplots
vector controlling which subplots to create
col1
color of some points/lines
col2
color of other points/lines
legendloc
location of legend (see ?legend for more info)
plotdir
directory where PNG files will be written. by default it will
be the directory where the model was run.
labels
vector of labels for plots (titles and axis labels)
pwidth
width of plot written to PNG file
pheight
height of plot written to PNG file
res
resolution for PNG file
ptsize
ptsize for PNG file
cex.main
character expansion for plot titles
verbose
return updates of function progress to the R GUI?