Learn R Programming

aroma.affymetrix (version 2.2.0)

SmoothRmaModel: The SmoothRmaModel class

Description

Package: aroma.affymetrix Class SmoothRmaModel Object ~~| ~~+--ChromosomalModel ~~~~~~~| ~~~~~~~+--SmoothMultiarrayModel ~~~~~~~~~~~~| ~~~~~~~~~~~~+--SmoothRmaModel Directly known subclasses: public static class SmoothRmaModel extends SmoothMultiarrayModel This class represents the Chromosomal Smoothing Robust Multichip Analysis method.

Usage

SmoothRmaModel(...)

Arguments

...
Arguments passed to the constructor of SmoothMultiarrayModel.

Fields and Methods

Methods: rll{ getFitUnitGroupFunction - getRootPath - } Methods inherited from SmoothMultiarrayModel: as.character, clearCache, createOutputTuple, fitOneChromosome, getAsteriskTags, getBandwidth, getFitUnitGroupFunction, getOutputTuple, getRootPath, setBandwidth Methods inherited from ChromosomalModel: getListOfGenomeInformations, getPcuTheta, getPositionChipTypeUnit, as.character, clearCache, fit, getAlias, getAromaGenomeTextFile, getAsteriskTags, getChipType, getChipTypes, getChromosomes, getFullName, getFullNames, getGenome, getGenomeData, getGenomeFile, getListOfAromaUgpFiles, getName, getNames, getParentPath, getPath, getReportPath, getRootPath, getSets, getSetTuple, getTags, indexOf, nbrOfArrays, nbrOfChipTypes, setGenome Methods inherited from Object: asThis, getChecksum, $, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clearLookupCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFieldModifier, getFieldModifiers, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save