Learn R Programming

stringgaussnet (version 1.1)

addSIMoNeNetMappings: Add Cytoscape mapping for SIMoNeNet

Description

This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().

Usage

addSIMoNeNetMappings(mappings)

Arguments

mappings
A list where will be added the mapping attributes

Value

  • The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle function).

Details

The edge colors depend on spearman's rho values. This is red for positive correlations, and blue for negative correlations. The edge width is inversely proportionnal to the spearman's test p-value.

See Also

addNetworkStyle