Learn R Programming

stringgaussnet (version 1.1)

addShortPathSTRINGNetMappings: Add Cytoscape mapping for ShortPathSTRINGNet

Description

This function allows to add edge mapping in a pre-defined Cytoscape style. This function is called in addNetworkStyle().

Usage

addShortPathSTRINGNetMappings(mappings)

Arguments

mappings
A list where will be added the mapping attributes

Value

  • The mappings list updated, containing added JSON-like lists (converted to JSON objects by the addNetworkStyle() function).

Details

The edge transparency depends on the distance computed by Dijkstra's algorithm. Direct interactions are displayed by black solid lines, whereas indirect interactions are displayed by blue dashed lines.

See Also

addNetworkStyle