Description
Stores the results of any of the omicsPCA analyses.
Slots
InitialData- List of ExpressionSets, one for each set of omics data
Names- Character vector giving names for the input data
preprocessing- Character vector describing the preprocessing applied to the data
preproData- List of matrices containing data after preprocessing
caMethod- Character giving the component analysis method name
commonComps- Numeric giving the number of common components
distComps- Numeric vector giving the number of distinctive components for each block
scores- List of matrices of common and distinctive scores
loadings- List of matrices of common and distinctive loadings
VAF- List of matrices indicating VAF (Variability Explained For) for each component in each block of data
others- List containing other miscellaneous information specific to different SCA methods