This class contains a list of catNetwork
s and it is the output format of cnEvaluate
function
hamm
:an integer
, the hamming distance between the parent matrices of the found networks and the original network.
hammexp
:an integer
, the hamming distance between the exponents of the parent matrices.
tp
:an integer
, the number of true positives directed edges.
fp
:an integer
, the number of false positives directed edges.
fn
:an integer
, the number of false negatives directed edges.
pr
:a numeric
, precision.
sp
:a numeric
, specificity.
sn
:a numeric
, sensitivity(recall).
fscore
:a numeric
, the F-score.
skel.tp
:an integer
, the number of true positives undirected edges.
skel.fp
:an integer
, the number of false positives undirected edges.
skel.fn
:an integer
, the number of false negatives undirected edges.
order.fp
:an integer
, the number of false positive order relations.
order.fn
:an integer
, the number of false negative order relations.
markov.fp
:an integer
, the number of false positive Markov pairs.
markov.fn
:an integer
, the number of false negative Markov pairs.
KLdist
:a numerical
, the KL distance, currently inactive.
signature(object="catNetworkDistance")
:
Draw some distance plots.
See in the manual of cnCompare
function for description of different distance criteria.
catNetwork-class
, catNetworkEvaluate-class
, cnCompare
, cnPlot