cobindR (version 1.10.0)

configuration: configuration of cobindr object

Description

configuration of cobindr object

Usage

"configuration"(x)
"configuration"(x) <- value

Arguments

x

a cobindr object

value

returns the configuration object used in this cobindR object

Value

cobindR configuration object

See Also

uid,name,sequences,bg_sequences,desc,configuration,binding_sites,bg_binding_sites,pfm,pairs,bg_pairs,pairs_of_interest

Examples

cfg <- cobindRConfiguration()
sequence_type(cfg) <- 'fasta'
sequence_source(cfg) <- system.file('extdata/sox_oct_example_vignette_seqs.fasta',package='cobindR')
sequence_origin(cfg) <- 'Mouse Embryonic Stem Cell Example ChIP-Seq Oct4 Peak configuration'
cbr <- cobindr(cfg)
configuration(cbr)