reexports

n_cpus

ddply

ldply

llply

%&gt;%

%&lt;&gt;%

glimpse

na.omit

left_join

mutate

pull

relocate

rename

select

slice

slice_head

slice_tail

slice_min

slice_max

slice_sample

list_metrics

match_metric

ggsave

These objects are imported from other packages. Follow the links
below to see their documentation.
<dl>
 <dt>dplyr</dt>
<dd><code><a href="https://dplyr.tidyverse.org/reference/mutate-joins.html">left_join</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/mutate.html">mutate</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/pull.html">pull</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/relocate.html">relocate</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/rename.html">rename</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/select.html">select</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice_head</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice_max</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice_min</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice_sample</a></code>, <code><a href="https://dplyr.tidyverse.org/reference/slice.html">slice_tail</a></code></dd>
 <dt>ecodive</dt>
<dd><code>list_metrics</code>, <code>match_metric</code>, <code>n_cpus</code></dd>
 <dt>ggplot2</dt>
<dd><code><a href="https://ggplot2.tidyverse.org/reference/ggsave.html">ggsave</a></code></dd>
 <dt>magrittr</dt>
<dd><code>%&lt;&gt;%</code>, <code>%&gt;%</code></dd>
 <dt>pillar</dt>
<dd><code><a href="https://pillar.r-lib.org/reference/glimpse.html">glimpse</a></code></dd>
 <dt>plyr</dt>
<dd><code><a href="/link/?package=rbiom&version=3.1.0" data-mini-rdoc="rbiom::.">.</a></code>, <code><a href="/link/ddply?package=rbiom&version=3.1.0" data-mini-rdoc="rbiom::ddply">ddply</a></code>, <code><a href="/link/ldply?package=rbiom&version=3.1.0" data-mini-rdoc="rbiom::ldply">ldply</a></code>, <code><a href="/link/llply?package=rbiom&version=3.1.0" data-mini-rdoc="rbiom::llply">llply</a></code></dd>
 <dt>stats</dt>
<dd><code><a href="/link/na.omit?package=rbiom&version=3.1.0" data-mini-rdoc="rbiom::na.omit">na.omit</a></code></dd>
</dl>

internal

A toolkit for working with Biological Observation Matrix ('BIOM') files.
Read/write all 'BIOM' formats. Compute rarefaction, alpha diversity, and
beta diversity (including 'UniFrac'). Summarize counts by taxonomic level.
Subset based on metadata. Generate visualizations and statistical analyses.

Daniel P. Smith

rbiom

Integrated Analysis and Visualization of Microbiome Data

Alkek Center for Metagenomics and Microbiome Research 

reexports function

These objects are imported from other packages. Follow the links
below to see their documentation.
<dl>
 <dt>dplyr</dt>
<dd><code><a href='https://dplyr.tidyverse.org/reference/mutate-joins.html'>left_join</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/mutate.html'>mutate</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/pull.html'>pull</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/relocate.html'>relocate</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/rename.html'>rename</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/select.html'>select</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice_head</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice_max</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice_min</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice_sample</a></code>, <code><a href='https://dplyr.tidyverse.org/reference/slice.html'>slice_tail</a></code></dd>


 <dt>ecodive</dt>
<dd><code>list_metrics</code>, <code>match_metric</code>, <code>n_cpus</code></dd>


 <dt>ggplot2</dt>
<dd><code><a href='https://ggplot2.tidyverse.org/reference/ggsave.html'>ggsave</a></code></dd>


 <dt>magrittr</dt>
<dd><code>%&lt;&gt;%</code>, <code>%&gt;%</code></dd>


 <dt>pillar</dt>
<dd><code><a href='https://pillar.r-lib.org/reference/glimpse.html'>glimpse</a></code></dd>


 <dt>plyr</dt>
<dd><code><a href='https://rdrr.io/pkg/plyr/man/quoted.html'>.</a></code>, <code><a href='https://rdrr.io/pkg/plyr/man/ddply.html'>ddply</a></code>, <code><a href='https://rdrr.io/pkg/plyr/man/ldply.html'>ldply</a></code>, <code><a href='https://rdrr.io/pkg/plyr/man/llply.html'>llply</a></code></dd>


 <dt>stats</dt>
<dd><code><a href='https://rdrr.io/r/stats/na.fail.html'>na.omit</a></code></dd>


</dl>

Objects exported from other packages — reexports

Objects exported from other packages

reexports: Objects exported from other packages

Description

Arguments