This function produces a density plot of the permutation $\delta_p$ values.
Usage
gDist(out)
Arguments
out
object resulting from gPCA.batchdetect() call.
References
Reese, S. E., Archer, K. J., Therneau, T. M., Atkinson, E. J., Vachon, C. M., de Andrade, M., Kocher, J. A., and Eckel-Passow, J. E. A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal components analysis. Bioinformatics, (in review).