genomeInfo

Information for the 31 samples downloaded from the Short Read Archive from 
studies comparing CEU and YRI populations. This data is used to specify the 
adjustment variables in <a href="/link/calculateStats?package=derfinder&version=1.6.4" rd-options="" data-mini-rdoc="derfinder::calculateStats">calculateStats</a>. The data is sorted according 
to the BAM files identifiers. Reads were 36bp long.

datasets

This package provides functions for annotation-agnostic
    differential expression analysis of RNA-seq data. Two implementations of
    the DER Finder approach are included in this package: (1) single base-level
    F-statistics and (2) DER identification at the expressed regions-level.
    The DER Finder approach can also be used to identify differentially bounded
    ChIP-seq peaks.

Leonardo Collado-Torres

derfinder

Annotation-agnostic differential expression analysis of RNA-seq data at
    base-pair resolution via the DER Finder approach

genomeInfo function

Information for the 31 samples downloaded from the Short Read Archive from 
studies comparing CEU and YRI populations. This data is used to specify the 
adjustment variables in <a href="calculateStats" rd-options="">calculateStats</a>. The data is sorted according 
to the BAM files identifiers. Reads were 36bp long.

genomeInfo: Genome samples information

Description

Arguments

Details

References

See Also