Annotation-agnostic differential expression analysis of RNA-seq data at
base-pair resolution via the DER Finder approach
Description
This package provides functions for annotation-agnostic
differential expression analysis of RNA-seq data. Two implementations of
the DER Finder approach are included in this package: (1) single base-level
F-statistics and (2) DER identification at the expressed regions-level.
The DER Finder approach can also be used to identify differentially bounded
ChIP-seq peaks.