seqinr (version 1.0-1)

getType: To Get Sequence Type

Description

This function allows to get all the sequence's type present in the opened ACNUC databank.

Usage

getType(socket)

Arguments

socket
An object of class connection returned by choosebank.

Value

  • It returns a list containing for each sequence type, a short description.

References

� To have an overview of the seqinR's functionnality, please consult this vignette: Charif, D., Lobry, J.R. (2005) SeqinR: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis. Springer Verlag, Biological and Medical Physics/Biomedical Series, in preparation.

See Also

choosebank, query, plot.SeqAcnucWeb

Examples

Run this code
s = choosebank("genbank")
geType(s$socket)�

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