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rdacca.hp (version 1.1-1)

Hierarchical and Variation Partitioning for Canonical Analysis

Description

This function conducts variation partitioning and hierarchical partitioning to calculate the unique, shared (referred as to "common") and individual contributions of each predictor (or matrix) towards explained variation (R-square and adjusted R-square) on canonical analysis (RDA,CCA and db-RDA), applying the algorithm of Lai J.,Zou Y., Zhang J.,Peres-Neto P.(2022) Generalizing hierarchical and variation partitioning in multiple regression and canonical analyses using the rdacca.hp R package.Methods in Ecology and Evolution,13: 782-788 .

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Install

install.packages('rdacca.hp')

Monthly Downloads

883

Version

1.1-1

License

GPL

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Maintainer

Jiangshan Lai

Last Published

August 24th, 2024

Functions in rdacca.hp (1.1-1)

permu.hp

Permutation Test of Hierarchical Partitioning for Canonical Analysis
odd

Internal function for rdacca.hp() to determine whether the odd number
rdacca.hp

Hierarchical and Variation Partitioning for Canonical Analysis Without Limiting the Number of Predictors (Matrices)
plot.rdaccahp

Plot for a rdacca.hp object
genList

Internal function for rdacca.hp()
creatbin

Internal function for rdacca.hp() to create diagonal matrix