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exprso (version 0.5.1)

modTMM: Normalize Data

Description

modTMM normalizes feature data.

Usage

modTMM(object, method = "TMM")

Arguments

object

An ExprsArray object to undergo pre-processing.

method

A character string. The method used by calcNormFactors. Defaults to the "TMM" method.

Value

A pre-processed ExprsArray object.

Details

This method normalizes data using the calcNormFactors function from the edgeR package. It returns the original counts multiplied by the effective library size factors.