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mstate (version 0.2.6)

Data preparation, estimation and prediction in multi-state models

Description

Functions for data preparation, descriptives, hazard estimation and prediction with Aalen-Johansen or simulation in competing risks and multi-state models

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Version

Install

install.packages('mstate')

Monthly Downloads

9,358

Version

0.2.6

License

GPL (>= 2)

Maintainer

Hein Putter

Last Published

January 6th, 2011

Functions in mstate (0.2.6)

events

Count number of observed transitions
paths

Find all possible trajectories through a given multi-state model
probtrans

Compute subject-specific or overall transition probabilities with standard errors
crprep

Function to create weighted data set for competing risks analyses
EBMT data

Data from the European Registry for Blood and Marrow Transplantation (EBMT)
EBMT year of relapse data

Data from the European Registry for Blood and Marrow Transplantation (EBMT)
summary.probtrans

Summary method for a probtrans object
mssample

Sample paths through a multi-state model
HIV/AIDS SI data

Data from the Amsterdam Cohort Studies on HIV infection and AIDS
msboot

Bootstrap function in multi-state models
msfit

Compute subject-specific transition hazards with (co-)variances
plot.probtrans

Plot method for a probtrans object
transMat

Define transition matrix for multi-state model
summary.msfit

Summary method for an msfit object
EBMT platelet recovery data

Data from the European Registry for Blood and Marrow Transplantation (EBMT)
Liver cirrhosis data

Abnormal prothrombin levels in liver cirrhosis
EBMT cause of death data

Data from the European Registry for Blood and Marrow Transplantation (EBMT)
expand.covs

Expand covariates in dataset in long format
plot.msfit

Plot method for an msfit object
print.msdata

Print method for a msdata object
mstate-package

Data preparation, estimation and prediction in multi-state models
Cuminc

Calculate nonparametric cumulative incidence functions and associated standard errors
msprep

Function to prepare dataset for multi-state modeling in long format from dataset in wide format
redrank

Reduced rank proportional hazards model for competing risks and multi-state models
bmt

BMT data from Klein and Moeschberger