taxa (version 0.3.2)

n_subtaxa: Get number of subtaxa

Description

Get number of subtaxa for each taxon in an object of type taxonomy() or taxmap()

obj$n_subtaxa()
n_subtaxa(obj)

Arguments

obj

(taxonomy() or taxmap())

Value

numeric

See Also

Other taxonomy data functions: classifications, id_classifications, is_branch, is_internode, is_leaf, is_root, is_stem, map_data_, map_data, n_leaves_1, n_leaves, n_subtaxa_1, n_supertaxa_1, n_supertaxa, taxon_ids, taxon_indexes, taxon_names, taxon_ranks

Examples

# NOT RUN {
# Count number of subtaxa within each taxon
n_subtaxa(ex_taxmap)

# Filter taxa based on number of subtaxa
#  (this command removed all leaves or "tips" of the tree)
filter_taxa(ex_taxmap, n_subtaxa > 0)

# }