CFAssay (version 1.6.0)

plotExp.cfa2way: Diagnostic plot of experimental replicates for two-way analysis of cell survival data

Description

This function plots the estimated means of a two-way ANOVA for each experiment in a series of plots. It is recommended to direct it in a pdf-file.

Usage

"plotExp"(x, labels=c(A="A",B="B"), ...)

Arguments

x

an R object of class cfa2way and resulting from function cfa2way.

labels

Labels for output description. These describe the meaning of A and of B.

...

further arguments to pass to generic function plotExp.

See Also

cfa2way

Examples

datatab<- read.table(system.file("doc", "exp2_2waycfa.txt", package="CFAssay"), header=TRUE, sep="\t")
names(datatab)  # has columns "x5fuCis" and "siRNA" 
fitcomp<- cfa2way(datatab, A="siRNA", B="x5fuCis", param="A/B")
print(fitcomp, labels=c(A="siRNA",B="x5fuCis"))
  pdf("TwoWay_experimental_plots.pdf")
    plotExp(fitcomp, labels=c(A="siRNA", B="x5fuCis"))
  dev.off()