ebimetagenomics (version 0.6)

plotOtu: Plots OTU count data

Description

This function takes as input a data frame representing OTU counts, such as returned by getRunOtu, plots it on the graphics device.

Usage

plotOtu(otu)

Arguments

otu

An OTU data frame.

Value

The function returns silently, and is called purely for its side-effect of rendering plots on the graphics device.

See Also

getSampleOtu, getRunOtu, convertOtuTad

Examples

# NOT RUN {
ps=getProjectSummary("SRP047083")
samp=projectSamples(ps)
runs=runsBySample(ps,samp[2])
otu=getRunOtu(runs[1])
plotOtu(otu)
# }