procset

 is the list with the names of the processed, the sdrf,
    the adf and the idf files and the path of the data as given by
    <code><a rd-options="ArrayExpress" href="/link/getAE?package=ArrayExpress&version=1.32.0&to=ArrayExpress" data-mini-rdoc="ArrayExpress::getAE">getAE</a></code>. 

files

 the name of the column to be extracted from the
  file. Obtained using <code><a rd-options="ArrayExpress" href="/link/getcolproc?package=ArrayExpress&version=1.32.0&to=ArrayExpress" data-mini-rdoc="ArrayExpress::getcolproc">getcolproc</a></code>.

procol


  <code>procset</code> converts local MAGE-TAB files into an
  <code><a rd-options="Biobase:class.ExpressionSet" href="/link/ExpressionSet?package=ArrayExpress&version=1.32.0&to=Biobase%3Aclass.ExpressionSet" data-mini-rdoc="Biobase:class.ExpressionSet::ExpressionSet">ExpressionSet</a></code>.
 

datasets

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Ugis Sarkans

ArrayExpress

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

procset function

is the list with the names of the processed, the sdrf,
    the adf and the idf files and the path of the data as given by
    <code><a href="getAE" rd-options="ArrayExpress">getAE</a></code>.

the name of the column to be extracted from the
  file. Obtained using <code><a href="getcolproc" rd-options="ArrayExpress">getcolproc</a></code>.

<code>procset</code> converts local MAGE-TAB files into an
  <code><a href="ExpressionSet" rd-options="Biobase:class.ExpressionSet">ExpressionSet</a></code>.

procset: Convert processed MAGE-TAB files into a Bioconductor object

Description

Usage

Arguments

See Also

Examples