# NOT RUN {
require(stacomiR)
stacomi(gr_interface=FALSE,
login_window=FALSE,
database_expected=FALSE)
# the following will load the data provided the user has access to the database
# with data in the iav example scheme.
# }
# NOT RUN {
r_mig_env<-new("report_mig_env")
r_mig_env<-choice_c(r_mig_env,
dc=c(5,6,12),
taxa=c("Anguilla anguilla"),
stage=c("AGJ","AGG","CIV"),
stationMesure=c("temp_gabion","coef_maree","phases_lune"),
datedebut="2008-01-01",
datefin="2008-12-31",
silent=FALSE)
r_mig_env<-charge(r_mig_env) # this is necessary to load operations, DF and DC
r_mig_env<-connect(r_mig_env)
r_mig_env<-calcule(r_mig_env,silent=TRUE)
# }
# NOT RUN {
data("r_mig_env")
# An example of plot with custom colors.
plot(r_mig_env,
color_station=c("temp_gabion"="red","coef_maree"="blue","phases_lune"="pink"),
color_dc=c("5"="yellow","6"="orange","12"="purple")
)
# }
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