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haploReconstruct (version 0.1.2)

rev_map,hbr-method: Map from windows to reconstructed haplotype-blocks

Description

A method returning information which reconstructed haplotype-blocks are present in which windows.

Usage

"rev_map"(object)

Arguments

object
object of class hbr containing the results of reconstructed haplotype-blocks

Value

list with elements corresponding to all windows that contain a reconstructed haplotype-block segment. Each element contains a vector of haplotype-block indices that overlap the respective window.

Details

The method operates on hbr objects and returns a list summarizing the mapping information from windows to reconstructed haplotype-blocks.

See Also

hbr ex_dat summary.hbr plot.hbr plot_cluster_trajectories plot_marker_trajectories map markers plot_hbr_freq inspect_window inspect_window_PCA inspect_window_avLink inspect_window_dbScan number_hbr