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fmri (version 1.9.2.1)

Analysis of fMRI Experiments

Description

Contains R-functions to perform an fMRI analysis as described in Tabelow et al. (2006) , Polzehl et al. (2010) , Tabelow and Polzehl (2011) .

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Version

Install

install.packages('fmri')

Monthly Downloads

499

Version

1.9.2.1

License

GPL (>= 2)

Maintainer

Karsten Tabelow

Last Published

November 15th, 2019

Functions in fmri (1.9.2.1)

fmri.metaPar

Linear Mixed-effects Meta-Analysis model for fMRI data
fmri.lmePar

Linear Mixed-effects Model for fMRI data
ICAfingerprint

IC fingerprinting
cutroi

I/O function
fmri.sgroupICA

Spatial group ICA for fmri
fmri.searchlight

Searchlight signal detection
getSearchlightPattern

Extract searchlight pattern from a SPM
gen_fmridata

Generate fmridata example
niftiImage2fmri

Create fmridata object from niftiImage
hvred

Translation between smoothness and bandwidth for Gaussian kernel
setmask

Add or replace mask in an fmridata object
read.NIFTI

I/O Functions
plot.fmripvalue

Visualize fMRI p-value maps
plot.fmridata

I/O functions
fmri.smooth

Smoothing Statistical Parametric Maps
read.ANALYZE

I/O Functions
read.DICOM

I/O function
fmri.stimulus

Linear Model for FMRI Data
sincfilter

A function for sinc-interpolation
summary.fmridata

I/O functions
slicetiming

slicetiming for fmridata-objects
fmri.pvalue

P-values
fmri.sICA

Spacial ICA for fmri data
Convert Between fmridata and oro.nifti

Convert Between fmridata and oro.nifti Objects
write.AFNI

I/O functions
read.AFNI

I/O function
print.fmridata

I/O functions
plot.fmriICA

Diagnostics plots for objects of class ''fmriICA''
write.NIFTI

I/O Functions
write.ANALYZE

I/O Functions
fmri.detrend

Detrend fMRI time series
fmri.lm

Linear Model for fMRI data
fmri.cluster

Cluster thresholding.
fmri.design

Linear Model for FMRI Data
extractData

Extract data or residuals from a fmridata object
fmri.designG

Design matrix for fMRI group analysis