Return the RxODE coefficients
Sample a covariance Matrix from the Posteior Inverse Wishart distribution.
Check to see if this is an rxSolve object.
Remove print statements
Return Rtools base
Update Solved object with '+'
Remove INIs
Creates a logical matrix for block matrixes.
Print information about the RxODE object.
Calculate the full Jacobian for a model
Setup Rtools path
Return the C file associated with the RxODE object
Print the rxCoef object
Get the number of cores in a system
Objects exported from other packages
Scaled Inverse Chi Squared distribution
Second command in chaining commands
Cleanup anonymous DLLs
Compile a model if needed
Current Condition for RxODE object
Delete the DLL for the model
Clear memoise cache for RxODE
Expand if/else clauses into mutiple different types of lines.
First Order Expansion of ETA
Add sampling to eventTable
Generalized Cholesky Matrix Decomposition
Initial Values and State values for a RxODE object
Check the type of an object using Rcpp
Create an ODE-based model specification
Get model properties without compiling it.
Create an event table object
Permissive or Strict RxODE sytax options
Checks if the RxODE object was built with the current build
Left handed Variables
Prepare Pred function for inclusion in RxODE
Determine if the DLL associated with the RxODE object is loaded
Returns a list of physical drives that have been or currently are
mounted to the computer.
Find the assignments in R expression
Add dosing to eventTable
Print the rxCoefSolve object
Invert matrix using Rcpp Armadilo.
Print x using the message facility
RxODE progress bar functions
Fit/Evaulate FOCEi
Generate an example (template) of a dosing regimen shiny app
Return the md5 of an RxODE object or file
This translates the parameters specified by the model in the correct type of solving.
Add a return statment to a function.
Assign pointer based on model variables
Print rxDll object
Free the C solving information.
Jacobian and parameter derivatives
Reload RxODE DLL
Choose the type of sums to use for RxODE.
Use cat when RxODE.verbose is TRUE
rxChain Chain or add item to solved system of equations
Get Omega^-1 and derivatives
Setup the initial conditions.
Creates an object for calculating Omega/Omega^-1 and derivatives
Require namespace, otherwise throw error.
Get RxODE model from object
Return a list of reserved functions and variables from sympy
Split line into multiple lines at + or - breaks
Return the DLL associated with the RxODE object
Calculate the sensitivity equations for a model
Format rxSolve and related objects as html.
Delete variable if exists.
Remove variables created by RxODE from the SymPy environment.
Load RxODE object
Does the varaible exist in the SymPy Python environment?
Validate RxODE
Choose the type of product to use in RxODE. These are used in the
RxODE prod
blocks
Return the expanded expression (via SymPy)
Get the normalized model
Unload RxODE object
Recast model in terms of sum/prod
Version and repository for this dparser package.
Add undefined variables to SymPy
All model variables for a RxODE object
Get the rxModels information
Prepare Error function for inclusion in RxODE
Optimize RxODE for computer evaluation
Setup a SymPy environment that sets up the specified RxODE model.
Sync options with RxODE varaibles
Parse PK function for inclusion in RxODE
Options for RxODE
Summary of rxDll object
Yeo-Johnson Transformation
Setup SymPy environment if needed
Parameters specified by the model
Setup Pred function based on RxODE object.
Simulate Parameters from a Theta/Omega specification
Start SymPy
Setup the initial conditions.
Format theta and eta for parameter estimate values in RxODE
Solves a ODE equation
This function splits a function based on + or - terms
Use Shiny to help develop an RxODE model
Fix SymPy expressions to be R parsable expressions
State variables
Return the square root of general square matrix A
Setup SymPy functions
Return the dimension of the built-in derivatives/inverses
Print expanded information about the RxODE object.
Execute sympy statement.
Calculate df/dy derivatives
Execute Python statement without getting the return value.
Return the version of SymPy that is running
Setup SymPy variables
Translate the model to C code if needed
Converts model specification to/from a SymPy language
Setup Python and SymPy for windows
Setup Windows components for RxODE
Remove Jacobian
Cox Box transformation
Remove sensitivity equations